{"id":92,"date":"2013-01-30T01:01:12","date_gmt":"2013-01-30T01:01:12","guid":{"rendered":"http:\/\/blogs.rochester.edu\/PresgravesLab\/?page_id=92"},"modified":"2025-08-15T17:40:29","modified_gmt":"2025-08-15T17:40:29","slug":"publications","status":"publish","type":"page","link":"http:\/\/blogs.rochester.edu\/PresgravesLab\/?page_id=92","title":{"rendered":"Publications"},"content":{"rendered":"

Muirhead, C.A., E. Mart\u00ed, E.H. Schorren, J.A.C. Uy and D.C. Presgraves (2025) Genomic origins and evolution of neo-sex chromosomes in Pacific island birds<\/a>. \u00a0PNAS<\/em> 122: e2503746122.<\/p>\n

Shogren, E.H., J.M. Sardell, C.A. Muirhead, E. Mart\u00ed, R.G. Boyle, D.C. Presgraves and J.A.C. Uy (2024) Recent secondary contact, genome-wide admixture, and limited introgression of neo-sex chromosomes between two Pacific island bird species<\/a>. \u00a0PLoS Genetics<\/em> 20: e1011360.<\/p>\n

Navarro-Dominguez, B., C.-H. Chang, C.L. Brand, C.A. Muirhead, D.C. Presgraves and A.M. Larracuente (2022) Epistatic selection on a selfish Segregation Distorter<\/em> supergene: drive, recombination, and genetic load<\/a>. eLife:\u00a0<\/em>11:e78981<\/p>\n

Muirhead, C.A. and D.C. Presgraves (2021) Satellite DNA-mediated diversification of a sex-ratio meiotic drive gene family in Drosophila<\/a>. Nature Ecology & Evolution\u00a0<\/em>5:1604-1612.<\/p>\n

Presgraves, D.C. and C.D. Meiklejohn (2021) Hybrid sterility, genetic conflict and complex speciation: lessons from the Drosophila simulans<\/em>\u00a0clade specie<\/a>s. Frontiers in Genetics<\/em> 12: 669045.<\/p>\n

Brand, C.L., L. Wright and D.C. Presgraves (2019)\u00a0Positive selection and functional divergence at meiosis genes that mediate crossing over across the Drosophila<\/em> phylogeny<\/a>. \u00a0G3<\/em> 9:3201-3211.<\/p>\n

Meiklejohn, C.D., E.L. Landeen, K.E. Gordon, T. Rzatkiewicz, S.B. Kingan, A. Geneva, J.P. Vedanayagam, C.A. Muirhead, D. Garrigan, D.L. Stern, and D.C. Presgraves (2018) \u00a0Gene flow mediates the role of sex chromosome meiotic drive during complex speciation<\/a>. \u00a0eLife\u00a0<\/em>7: e35468.<\/p>\n

Payseur, B.A., D.C. Presgraves and D.A. Filatov (2018) Sex chromosomes and speciation<\/a>. Molecular Ecology <\/em>27: 3745-3748.<\/p>\n

Presgraves, D.C. (2018) Evaluating genomic signatures of “the large X-effect” during complex speciation<\/a>.\u00a0Molecular Ecology <\/em>27:3822-3830.<\/p>\n

Brand, C.L., M.V. Cattani, S.B. Kingan, E.L. Landeen and D.C. Presgraves (2018) Molecular\u00a0evolution at a meiosis gene mediates species differences in crossing over<\/a>.\u00a0Current\u00a0<\/em>Biology <\/em>28:1289-1295. \u00a0[also see Dispatch<\/a>\u00a0by B. Charlesworth]<\/p>\n

Zhang, Z. and D.C. Presgraves (2017) Translational compensation of gene copy number alterations by aneuploidy in Drosophila melanogaster<\/em><\/a>. Nucleic Acids Research <\/em>45: 2986-2993.<\/p>\n

Landeen, E.L., C.A. Muirhead, L. Wright, C.D. Meiklejohn and D.C. Presgraves (2016) Sex chromosome-wide transcriptional suppression and compensatory cis<\/em>-regulatory evolution mediate gene expression in the Drosophila<\/em> male germline<\/a>. PLoS Biology\u00a0<\/em>14:e1002499.<\/p>\n

Brand, C.L. and D.C. Presgraves (2016) Evolution: On the origin of symmetry, synapsis and\u00a0species<\/a>. Current Biology<\/em> 26: R319-337.<\/p>\n

Lindholm, A.K., K.A. Dyer, R.C. Firman, L. Fishman, W. Forstmeier, L. Holman, H. Johannesson, U. Knief, H. Kokko, A.M. Laraccuente, A. Manser, C. Montchamp-Moreau, V.G. Petrosyan, A. Pomiankowski, D.C. Presgraves, L.D. Safronova, A. Sutter, R.L. Unckless, R. Verspoor, N. Wedell, G.S. Wilkinson, T.A.R. Price. (2016) The ecology and evolutionary dynamics of meiotic drive<\/a>. Trends in Ecology and Evolution <\/em>31: 315-326.<\/p>\n

Muirhead, C.A. and D.C. Presgraves (2016) Hybrid incompatibilities, local adaptation, and the genomic distribution of natural introgression between species<\/a>. American Naturalist\u00a0<\/em>187:249-261.<\/span><\/p>\n

Zhang, Z. and\u00a0D.C. Presgraves (2016)\u00a0Drosophila X-linked genes have lower translation rates than autosomal genes.<\/a> Molecular Biology & Evolution <\/em>33: 413-428.<\/p>\n

Tang, S. and D.C. Presgraves (2015)<\/span> Lineage-specific evolution of the complex Nup160<\/em> hybrid incompatibility in Drosophila. <\/a>Genetics\u00a0<\/em>200: 1245-1254.<\/span><\/p>\n

Brand, C.L., A.M. Larracuente and D.C. Presgraves (2015)<\/span> Origin, evolution, and population\u00a0genetics of the selfish Segregation distorter<\/em> gene duplication in European and African populations of Drosophila melanogaster<\/em><\/a>. Evolution <\/em>69: 1271-1283.<\/span><\/p>\n

Garrigan, D., S.B. Kingan, A.J. Geneva, J.P. Vedanayagam and D.C. Presgraves (2014)\u00a0Genome diversity and divergence in Drosophila mauritiana<\/em>: multiple signatures of faster X evolution<\/a>. Genome Biology & Evolution<\/em>, 6: 2444-2458.<\/span><\/p>\n

Landeen, E.L. and D.C. Presgraves (2013) Evolution: From autosomes to sex chromosomes\u2014 and back<\/a>. Current Biology<\/em> 23: R848-850.<\/p>\n

Presgraves, D.C. (2013) Primer: Hitchhiking to speciation<\/a>. \u00a0PLoS Biology <\/em>11: e1001498.<\/p>\n

Meiklejohn, C.D. and D.C. Presgraves (2012)\u00a0Little evidence for demasculinization of the\u00a0Drosophila X<\/em>\u00a0chromosome among genes expressed in the male germline<\/a>.\u00a0Genome Biology and Evolution<\/em>\u00a04: 895-904.<\/p>\n

Cattani, M.V., S.B. Kingan and D.C. Presgraves (2012)\u00a0Cis<\/em>– and\u00a0trans<\/em>-factors contribute to heterogeneity in the rate of crossing over among the\u00a0Drosophila<\/em>\u00a0simulans<\/em>\u00a0clade species.<\/a>\u00a0Journal of Evolutionary Biology<\/em>\u00a025: 2014-2022.<\/p>\n

Larracuente, A.L. and D.C. Presgraves (2012)\u00a0The selfish\u00a0Segregation Distorter<\/em>\u00a0complex of\u00a0Drosophila melanogaster<\/em>.<\/a>\u00a0Genetics<\/em>\u00a0192: 33-53.<\/p>\n

Garrigan, D., S. Kingan, A. Geneva, K. Thornton, P. Andolfatto, A.G. Clark, and D.C. Presgraves (2012)\u00a0Genome sequencing reveals complex speciation of the\u00a0Drosophila simulans<\/em>\u00a0clade.<\/a>\u00a0Genome Research<\/em>\u00a022: 1499-1511.<\/p>\n

Cattani, M.V. and D.C. Presgraves (2012)\u00a0Incompatibility between X chromosome factor and pericentric heterochromatic region causes lethality in hybrids between\u00a0Drosophila melanogaster<\/em>\u00a0and its sibling species.<\/a>\u00a0Genetics<\/em>\u00a0191: 549-559.<\/p>\n

Xu, K., S. Oh, T. Park, D.C. Presgraves and S.V. Yi (2012)\u00a0Lineage-specific variation in slow- and fast-X evolution in primates.<\/a>\u00a0Evolution<\/em>\u00a066: 1751-1761.<\/p>\n

G\u00e9rard, P.R. and D.C. Presgraves (2012)\u00a0Abundant genetic variability in\u00a0Drosophila simulans<\/em>\u00a0for hybrid female lethality in interspecific crosses to\u00a0D. melanogaster<\/em>.<\/a>\u00a0Genetics Research<\/em>\u00a094: 1-7.<\/p>\n

Meiklejohn, C.D., E.L. Landeen, J.M. Cook, S.B. Kingan and D.C. Presgraves (2011)\u00a0Sex chromosome-specific regulation in the\u00a0Drosophila<\/em>\u00a0male germline but little evidence for chromosomal dosage compensation or meiotic inactivation.<\/a>\u00a0PLoS Biology<\/em>\u00a09: e1001126.<\/p>\n

Presgraves, D.C. (2010)\u00a0Speciation genetics: Search for the missing snowball.<\/a>\u00a0Current Biology<\/em> 20: R1073-74.<\/p>\n

Presgraves, D.C. (2010)\u00a0Darwin and the origin of interspecific genetic incompatibilities.<\/a>\u00a0American Naturalist<\/em>\u00a0176: S45-S60.<\/p>\n

Presgraves, D.C. and R.E. Glor (2010)\u00a0Evolutionary biology: Speciation on islands.<\/a>\u00a0Current Biology<\/em>\u00a020: R440-R442.<\/p>\n

Presgraves, D.C. (2010)\u00a0The molecular evolutionary basis of species formation.<\/a>\u00a0Nature Reviews Genetics<\/em>\u00a011: 175-180.<\/p>\n

Presgraves, D.C. and S.V. Yi (2009)\u00a0Doubts about complex speciation between humans and chimpanzees.<\/a>\u00a0Trends in Ecology & Evolution<\/em>, 24: 533-540.<\/p>\n

Presgraves, D.C., P.R. G\u00e9rard, A. Cherukuri and T.W. Lyttle (2009)\u00a0Large-scale selective sweep among\u00a0Segregation Distorter<\/em>\u00a0chromosomes in African populations of\u00a0Drosophila melanogaster<\/em>.<\/a>\u00a0PLoS Genetics<\/em>\u00a05(5): e1000463.<\/p>\n

G\u00e9rard, P. and D.C. Presgraves (2009)\u00a0Genetic analysis of hybrid incompatibilities in\u00a0Drosophila<\/em>.<\/a>\u00a0In:\u00a0Encyclopedia of Life Sciences (ELS)<\/em>. John Wiley & Sons, Ltd: Chichester. DOI:10.1002\/9780470015902.a0020896<\/p>\n

Cattani, M.V. and D.C. Presgraves (2009)\u00a0Genetics and lineage-specific evolution of a lethal hybrid incompatibility between\u00a0Drosophila mauritiana<\/em>\u00a0and its sibling species.<\/a>\u00a0Genetics<\/em>\u00a0181: 1545-1555.<\/p>\n

<\/a>Tang, S. and D.C. Presgraves (2009)\u00a0Evolution of the\u00a0Drosophila<\/em>\u00a0nuclear pore complex results in multiple hybrid incompatibilities.<\/a>\u00a0Science<\/em>\u00a0323: 779-782.<\/p>\n

Seluanov, A., C. Hine, M. Bozzella, A. Hall, T. H. C. Sasahara, A. A. C. M. Ribeiro, K. C. Catania, D. C. Presgraves and V. Gorbunova (2008)\u00a0Distinct tumor suppressor mechanisms evolve rodent species that differ in size and lifespan<\/a>.\u00a0Aging Cell<\/em>\u00a07: 813-823.<\/p>\n

<\/a>Presgraves, D.C. (2008)\u00a0Sex chromosomes and speciation in Drosophila<\/a>.\u00a0Trends in Genetics<\/em>\u00a024: 336-343.<\/p>\n

Presgraves, D.C. (2008) Drive and sperm: Evolution & genetics of male meiotic drive. In\u00a0Sperm Evolution<\/em>, Eds. Birkhead, T.R., D. Hosken, S. Pitnick. Academic Press.<\/p>\n

<\/a>Masly, J.P. and D.C. Presgraves (2007)\u00a0High-resolution genome-wide dissection of the two rules of speciation in\u00a0Drosophila<\/em>.<\/a>\u00a0PLoS Biology<\/em>, 5: 1890-1898.<\/p>\n

<\/a>Presgraves, D.C. (2007)\u00a0Does genetic conflict drive molecular evolution of nuclear transport genes in\u00a0Drosophila?<\/em><\/a>\u00a0BioEssays<\/em>\u00a029: 386-391.<\/p>\n

Presgraves, D.C. (2007)\u00a0Speciation genetics: Epistasis, conflict and the origin of species<\/a>.\u00a0Current Biology<\/em>\u00a017: R125-R127.<\/p>\n

<\/a>Presgraves, D.C. and W. Stephan. (2007)\u00a0Pervasive adaptive evolution among interactors of the\u00a0Drosophila<\/em>\u00a0hybrid inviability gene,\u00a0Nup96<\/em><\/a>.\u00a0Molecular Biology and Evolution<\/em>\u00a024: 306-314. [Listed as part of Science magazine\u2019s 2006 Breakthrough of the Year, #7]<\/p>\n

Seluanov, A., Z. Chen, C. Hine. A.R. Riberio, K.C. Catania, D.C. Presgraves and V. Gorbunova. (2007)\u00a0Telomerase activity coevolves with body mass not lifespan<\/a>.\u00a0Aging Cell<\/em>\u00a06: 45-52.<\/p>\n

<\/a>Presgraves, D.C. (2006)\u00a0Intron length evolution in\u00a0Drosophila<\/em><\/a>. Molecular Biology and Evolution<\/em>\u00a023: 2203-2213.<\/p>\n

Presgraves, D.C. (2005)\u00a0Recombination enhances protein adaptation in\u00a0Drosophila melanogaster.<\/em><\/a>\u00a0Current Biology<\/em>\u00a015: 1651-1656. [Faculty of 1000 selection]<\/p>\n

<\/a>Presgraves, D.C. (2005)\u00a0Evolutionary genetics: new genes for new jobs<\/a>.\u00a0Current Biology<\/em>\u00a015: R52-R53.<\/p>\n

<\/a>Orr, H.A., J.P. Masly and D.C. Presgraves (2004)\u00a0Speciation genes<\/a>.\u00a0Current Opinion in Genetics and Development\u00a0<\/em>14: 675-679.<\/p>\n

Presgraves, D.C., L. Balagopalan, S.A. Abmayr and H.A. Orr (2003)\u00a0Adaptive evolution drives divergence of a hybrid inviability gene between two species of\u00a0Drosophila<\/em><\/a>.\u00a0Nature<\/em>\u00a0243: 715-719. (Featured in \u201cNews & Views\u201d piece by M. Noor, pp. 699-700). [Faculty of 1000 selection]<\/p>\n

<\/a>Presgraves, D.C. (2003)\u00a0A fine-scale genetic analysis of hybrid incompatibilities in\u00a0Drosophila.<\/em><\/a>\u00a0Genetics<\/em>\u00a0163: 955-972.<\/p>\n

<\/a>Presgraves, D.C. (2002)\u00a0Patterns of postzygotic isolation in Lepidoptera.<\/a>\u00a0Evolution<\/em>\u00a056: 1168-1183.<\/p>\n

<\/a>Betancourt, A.B. and D.C. Presgraves (2002)\u00a0Linkage limits the power of natural selection in\u00a0Drosophila<\/em><\/a>.\u00a0Proceedings of the National Academy of Sciences<\/em>, USA 99: 13616-13620. (Featured in \u201cDispatch\u201d piece by G. Marais and B. Charlesworth in Current Biology 13: R68-70)<\/p>\n

<\/a>Betancourt, A.B., D.C. Presgraves, and W.J. Swanson (2002)\u00a0A test for faster X evolution in\u00a0Drosophila<\/em><\/a>. Molecular Biology and Evolution<\/em>\u00a019: 1816-1819.<\/p>\n

Presgraves, D.C. (2000)\u00a0A genetic test of the mechanism of Wolbachia-induced cytoplasmic incompatibility in\u00a0Drosophila<\/em><\/a>. Genetics\u00a0<\/em>154: 771-776.<\/p>\n

<\/a>Orr, H.A. and D.C. Presgraves (2000)\u00a0Speciation by postzygotic isolation: forces, genes and molecules<\/a>.\u00a0BioEssays<\/em>\u00a022: 1085-1094.<\/p>\n

Ciecko, S.C. and D.C. Presgraves (1999) Recovery and mapping of an Antennapedia mutation in\u00a0Drosophila simulans. Drosophila Information Service<\/em>\u00a082: 120-121.<\/p>\n

Presgraves, D.C., R.H. Baker and G.S. Wilkinson (1999)\u00a0Coevolution of sperm and female reproductive tract morphology in stalk-eyed flies<\/a>.\u00a0Proceedings of the Royal Society of London<\/em>\u00a0B 266: 1041-1047. (Featured on cover).<\/p>\n

<\/a>Presgraves, D.C. and H.A. Orr (1998)\u00a0Haldane’s rule is obeyed in taxa lacking a hemizygous sex<\/a>.\u00a0Science<\/em>\u00a0282: 952-954. (Featured in a \u201cPerspectives\u201d piece by M. Turelli).<\/p>\n

Wilkinson, G.S., D.C. Presgraves and L. Crymes (1998)\u00a0Male eyespan in stalk-eyed flies indicates genetic quality by meiotic drive suppression<\/a>.\u00a0Nature<\/em>\u00a0391: 276-279. (Featured on cover and in a \u201cNews & Views\u201d piece by L.D. Hurst and A. Pomiankowski)<\/p>\n

Borgia, G. and D.C. Presgraves (1998)\u00a0Coevolution of exaggerated male display traits: a test of the threat-reduction hypothesis<\/a>.\u00a0Animal Behaviour\u00a0<\/em>56: 1121-1128.<\/p>\n

Presgraves, D.C., E. Severence and G.S. Wilkinson (1997)\u00a0Sex chromosome meiotic drive in stalk-eyed flies<\/a>.\u00a0Genetics<\/em>\u00a0147: 1169-1180.<\/p>\n","protected":false},"excerpt":{"rendered":"

Muirhead, C.A., E. Mart\u00ed, E.H. Schorren, J.A.C. Uy and D.C. Presgraves (2025) Genomic origins and evolution of neo-sex chromosomes in Pacific island birds. \u00a0PNAS 122: e2503746122. Shogren, E.H., J.M. Sardell, C.A. Muirhead, E. Mart\u00ed, R.G. Boyle, D.C. Presgraves and J.A.C. … Continue reading →<\/span><\/a><\/p>\n","protected":false},"author":12,"featured_media":3822,"parent":0,"menu_order":3000,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-92","page","type-page","status-publish","has-post-thumbnail","hentry"],"_links":{"self":[{"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/pages\/92","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/users\/12"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=92"}],"version-history":[{"count":61,"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/pages\/92\/revisions"}],"predecessor-version":[{"id":4352,"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/pages\/92\/revisions\/4352"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=\/wp\/v2\/media\/3822"}],"wp:attachment":[{"href":"https:\/\/blogs.rochester.edu\/PresgravesLab\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=92"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}