2016:
2015:
Zera, A.J., and J.A. Brisson. Evolutionary and ecological physiology of polyphenism: Integrating proximate and ultimate mechanisms. In: Integrative Organismal Biology, Oxford University Press. Invited Chapter.
Zera, A.J., N.N Vellichirammal, and J.A. Brisson. Endocrine circadian rhythm in wing-polymorphic Gryllus: Integrating chronobiology, endocrinology, and evolution. In: Crickets as a Model Organism: Development, Regeneration, and Behavior. Eds S. Noji, H.W. Horch, H. Ohuchi, and T. Mito, Springer. Invited chapter.
2014:
Brisson, J.A., and D. Tagu. 2014. Editorial overview: Insect genomics. Current Opinion in Insect Science. 1:v-vi.
Enders, L., Bickel, R.D., Brisson, J.A., Heng-Moss, T., Siegfried, B., Zera, A.J., and N. Miller. 2014. Soybean aphid (Hemiptera:Aphididae) response to soybean plant defense: stress levels, tradeoffs and cross-resistance. Environmental Entomology. 43: 47-57.
Fishman, L. and J. Jaenike. 2014. Selfish elements and genetic conflict. In: Princeton Guide to Evolution, Princeton University Press. Invited chapter.
Orr, H.A. and D.R. McNabney. 2014. Genetics of speciation. In: Princeton Guide to Evolution, Princeton University Press. Invited chapter.
Presgraves, D.C. 2013. Primer: Hitchhiking to speciation. PLoS Biology 11(2): e1001498.
Cattani, M.V., S.B. Kingan, and D.C. Presgraves. 2012. Cis- and trans-factors contribute to heterogeneity in the rate of crossing over among the Drosophila simulans clade species. Journal of Evolutionary Biology 25: 2014-2022.
Eickbush D.G. and T.H. Eickbush. 2012. R2 and R2/R1 hybrid non-autonomous retrotransposons derived by internal deletions of full-length elements. Mob DNA. 3(1): 10.
Jaenike, J. 2012. Population genetics of beneficial heritable symbionts. TREE 27(4): 226-232.
Stuart, Y.E., M.A. Landestoy, D.L. Mahler, D. Scantlebury, A.J. Geneva, P.S. VanMiddlesworth, and R.E. Glor. 2012. Two new introduced populations of the Cuban green anole (Anolis porcatus) in the Dominican Republic. IRCF Reptiles & Amphibians 19:71-75.
Werren, J.H. 2012. Commentary: Symbionts provide pesticide detoxification. PNAS 109(22), 8364-8365.
2011:
Unckless, R.L. (2011) A DNA virus of Drosophila. PloS One 6(10): e26564. [doi link]
Glor, R. E. (2011) Remarkable new evidence for island radiation in birds. Molecular Ecology 20:4823-4826. [doi link]
Chan X. Y. and J. D. Lambert (2011) Patterning a spiralian embryo: a segregated RNA for a Tis11 ortholog is required in the 3a and 3b cells of the Ilyanassa embryo. Developmental Biology 349:102-112.
Chakraborty, M., and J. D. Fry (2011) Drosophila lacking a homologue of mammalian ALDH2 have multiple fitness defects. Chemico-Biological Interactions 191: 296–302. [doi link]
Green, A.F., T.S. Ramsey, J. Ramsey (2011) Phylogeny and biogeography of ivies (Hedera spp., Araliaceae), a polyploid complex of woody vines. Systematic Botany 36:4 1-14. [doi link]
Meiklejohn, C.D., E.L. Landeen, J.M. Cook, S.B. Kingan and D.C. Presgraves (2011) Sex chromosome-specific regulation in the Drosophila male germline but little evidence for chromosomal dosage compensation or meiotic inactivation. PLoS Biology 9: e1001126. [doi link]
Dyer, K.A., C. Burke, and J. Jaenike (2011) Wolbachia-mediated persistence of mtDNA from a potentially extinct species. Molecular Ecology 20: 2805-2817. [doi link]
Jaenike, J. and T. Brekke (2011) Defensive endosymbionts: a cryptic trophic level in community ecology. Ecology Letters 14: 150-155. [doi link]
Ng, J. and R.E. Glor (2011) Genetic differentiation among populations of a Hispaniolan trunk anole that exhibit geographical variation in dewlap colour. Molecular Ecology 20:4302-4317. [doi link]
Mahler, D. L. and R.E. Glor (2011) Anolis cybotes cybotes (Hispaniolan Stout Anole) and Anolis marron (Jacmel Gracile Anole) Predation/Prey. Herpetological Review 42:272-273. [contact authors for PDF]
Glor, R.E. and D. Warren (2011) Testing ecological explanations for biogeographic boundaries. Evolution 68:673-683 [doi link]
Martinson, V.G., B.N. Danforth, R.L. Minckley, O. Rueppell, S. Tingek & N.A. Moran. (2011). A simple and distinctive microbiota exclusively associated with honey bees and bumble bees. Molecular Ecology. [doi link]
Scantlebury, D.P., J. Ng, M.A. Landestoy, A.J. Geneva, and R.E. Glor. (2011) Notes on activity patterns of five species of Sphaerodactylus (Squamata: Sphaerodactylidae) from the Dominican Republic. IRCF Reptiles & Amphibians 18:13-17. [contact authors for PDF]
Melville, J., E.G. Ritchie, S.N.J. Chapple, R.E. Glor, and J.A. Schulte II (2011) Evolutionary origins and diversification of dragon lizards in Australia’s tropical savannas. Molecular Phylogenetics and Evolution 58:257-270
2010:
Lambert, J.D. (2010) Developmental patterns in spiralian embryos. Current Biology 20:72-77.
Rabinowitz J. and J.D. Lambert (2010) Spiralian quartet developmental potential is regulated by specific localization elements that mediate asymmetric RNA segregation. Development 137:4039-4049.
Werren, J.H., Richards, S., Desjardins, C.A., Niehuis, O., Gadau, J., Colbourne, J.K., et al (2010) Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science 327:343-348. [doi link]
Rabosky, D. and R.E. Glor (2010) Equilibrium speciation dynamics in a model adaptive radiation of island lizards. PNAS. [doi link]
Presgraves, D.C. (2010) Darwin and the origin of interspecific genetic incompatibilities. American Naturalist 176:S45-S60. [journal link]
Jaenike, J., R. Unckless, S.N. Cockburn, L.M. Boelio, and S.J. Perlman. (2010) Adaptive evolution via symbiosis: recent spread of a defensive symbiont in Drosophila. Science 329:212-215. [doi link]
Garrigan, D., R. Lewontin and J. Wakeley (2010) Measuring the Sensitivity of Single-Locus “Neutrality Tests” Using a Direct Perturbation Approach. Molecular Biology and Evolution [doi link]
Stahlhut, J., C. Desjardins, M. Clark, L. Baldo, J. Russell, J. Werren, and J. Jaenike. (2010) The mushroom habitat as an ecological arena for global exchange of Wolbachia. Molecular Ecology 19:1940-1952. [doi link]
Loehlin, D., L.S. Enders, and J.H. Werren (2010) Evolution of sex-specific wing shape at the widerwing locus in four species of Nasonia. Heredity 104:260-269. [doi link]
Orr, H. A. (2010) The population genetics of beneficial mutations. Philosophical Transactions of the Royal Society B 365: 1195-1201 [doi link]
Williams, N.M., Crone, E.E., Roulston, T.H., Minckley, R.L., Packer, L., Potts, S.G. (2010) Ecological and life history traits predict bee species responses to environmental disturbances. Biological Conservation, 143:2280-2291. [doi link]
Desjardins, C., F. Perfectti, F., J. Bartos, L.S. Enders, and J.H. Werren (2010) The genetic basis of interspecies host preference difference in the model parasitoid Nasonia. Heredity 104:270-277. [doi link]
Glor, R.E. (2010) Phylogenetic insights on adaptive radiation. Annual Review of Ecology, Evolution, and Systematics. [doi link]
Michael E. Clark, F. P. O’Hara, A. Chawla, & John H. Werren (2010) Behavioral and Spermagenic Hybrid Sterilty in Nasonia. Heredity 104(3):289-301;. [doi link]
Shpak, M., J. Wakeley, D. Garrigan, R. Lewontin (2010) A STRUCTURED COALESCENT PROCESS FOR SEASONALLY FLUCTUATING POPULATIONS. Evolution [doi link]
Raychoudhury, Rhitoban, Roger Burks, Deodoro C S G Oliveira, David Loehlin, Bernd Grillenberger, J H Werren (2010) Behavioral and Genetic Characteristics of a New Species of Nasonia. Heredity 104(3):278-88. [doi link]
Bordenstein, S.R., C. Brothers, G. Wolfe, M. Bahr, R.L. Minckley, M.E. Clark. J.J. Wernegreen, W.S. Reznikoff, & J.H. Werren (2010) Using the Wolbachia bacterial symbiont to teach inquiry-based science: A high school laboratory series. American Biology Teacher. 72:478-483. [doi link]
Geneva, A. and D. Garrigan (2010) Population Genomics of Secondary Contact. Genes 1:124-142. [doi link]
Geneva, A.J., J. Ng, D. Scantlebury, A. Ossip-Klein, S. Rudman, A. Kelly, C. Reinhardt, and R.E. Glor (2010) Natural history of West Indian amphibians and reptiles [book review]. Herpetological Review 41:249-250. [PDF link]
Presgraves, D.C. and R. E. Glor. 2010. Evolutionary biology: speciation on islands. Current Biology 20:R440-442 [doi link]
Jaenike, J., J.K. Stahlhut, L.M. Boelio, and R.L. Unckless (2010) Association between Wolbachia and Spiroplasma within Drosophila neotestacea: an emerging symbiotic mutualism. Molecular Ecology 19 (2):414-425 2010 [doi link]
Sweigart, A.L. (2010) Simple Y-autosomal Incompatibilities Cause Hybrid Male Sterility in Reciprocal Crosses Between Drosophila virilis and D. americana. Genetics. [doi link]
Fry, J.D. (2010) The genomic location of sexually antagonistic variation: some cautionary comments.
Evolution 64-5: 1510–1516. [doi link]
Lambert, J.D. (2010) Developmental patterns in spiralian embryos. Current Biology 20:2 72-77. [doi link]
Eickbush D.G. and T.H. Eickbush (2010) R2 retrotransposons encode a self-cleaving ribozyme for processing from an rRNA co-transcript. Molecular and Cellular Biology. [doi link]
Presgraves, D.C. (2010) The molecular evolutionary basis of species formation. Nature Reviews Genetics 11: 175-180. [doi link]
Stage, D.E. and T.H. Eickbush (2010) Maintenance of multiple lineages of R1 and R2 retrotransposable elements in the ribosomal RNA gene loci of Nasonia. Insect Mol. Biol. S1:37-48. [doi link]
Harmon, H. and R.E. Glor (2010) Poor performance of the Mantel test in phylogenetic comparative analyses. Evolution. [doi link]
Mahler, D., L. Revell, R.E. Glor, J.B. Losos (2010) Ecological opportunity and the rate of morphological evolution in the diversification of Greater Antillean anoles. Evolution. [doi link]
Warren, D., R. E. Glor, M. Turelli (2010) ENMTools: A toolbox for comparative studies of environmental niche models. Ecography. [doi link]
Loehlin, D. Oliveira, R. Edwards, J.D. Giebel, M. Clark, M.V. Cattani, L. van de Zande, E. Verhulst, L.W. Beukeboom, M. Munoz-Torres, and J.H. Werren (2010) Non-coding Changes Cause Sex-specific Wing Size Differences Between Closely Related Species of Nasonia. PLOS Genetics 6(1):e1000821. [doi link]
Raychoudhury,R., B.K. Grillenberger, J. Gadau, R. Bijlsma, L. van de Zande, J.H. Werren, and L.W. Beukeboom (2010) Phylogeography of Nasonia vitripennis (Hymenoptera) indicates a mitochondrial-Wolbachia sweep in North America. Heredity 104: 318-326. [doi link]
De Graaf, M. Brunain, B. Scharlaken, N. Pieren, B. Devreese, D.G. Ebo, W.J. Stevens, C. Desjardins, J.H. Werren and F.J. Jacobs (2010) Novel Apis mellifera and Nasonia vitripennis venom-associated protein with an ancient C1q-like domain. Insect Mol. Biol. 19(S1):1-10. [publisher link]
De Graaf, D.C., M. Brunain, C.A. Desjardins, J.H. Werren and F.J. Jacobs (2010) Insights into the venom composition of the ectoparasitoid wasp Nasonia vitripennis from bioinformatic and proteomic studies.. Insect Mol. Biol. 19(S1):11-26. [publisher link]
Viljakainen, L., D.C.S.G. Oliveira, J. H. Werren, and S. K. Behura (2010) Transfers of mitochondrial DNA to the nuclear genome in the wasp Nasonia vitripennis. Insect Mol. Biol. 19(S1): 27-36. [pubmed link]
Niehuis, O., J.D. Gibson, M. Rosenberg, B. Pannebakker, T. Koevoets, A.K. Judson, C. Desjardins, K. Kennedy, D. Duggan, J.H. Werren, L.W. Beukeboom, J. Gadau (2010) Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia. PloS One 5(e8597): 1-13. [pubmed link]
Baldo, L., C.A. Desjardins, J.A Russell, J.K. Stahlhut and J.H. Werren. Baldo, L and J.H. Werren (2010) Accelerated Microevolution in an Outer Membrane Protein (OMP) of the Intracellular Bacteria Wolbachia. BMC Evolutionary Biology 10(48): 1-18. [BMC link]
Hunt, B.G., S. Wyder, N. Elango, J.H. Werren, E.M. Zdobnov, S.V. Yi, and A.D. Goodisman (2010) Sociality is linked to rates of protein evolution in a highly social insect. Mol. Biol. Evol. 27(3):497-500. [doi link]
Munoz-Torres, M., C. Saski, B. Blackmon, J. Romero-Severson, J. Tomkins, and J.H. Werren (2010) Development of BAC library resources for parasitic Hymenoptera (Nasonia vitripennis and Nasonia giraulti). Insect Molecular Biology 19(S1): 181-187. [publisher link]
Brendan G. Hunt, Stefan Wyder, Navin Elango, John H. Werren, Evgeny M. Zdobnov, Soojin V. Yi1, Michael A. D. Goodisman (2010) Sociality is linked to rates of protein evolution in a highly social insect. Mol Biol. Evol. [doi link]
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Kim, J., R. Cunningham, B. James, S. Wyder, J.D. Gibson, O. Niehuis, E.M. Zdobnov, H.M. Robertson, G.E. Robinson, J.H. Werren, and S. Sinha (2010) Functional Characterization of Transcription Factor Motifs Using Cross-species Comparison across Large Evolutionary Distances. PLoS Computational Biology. [doi link]
Wilkes, T., A.C. Darby, J. Choi, J.K. Colbourne, J.H. Werren, and G.D.D. Hurst (2010) The draft genome sequence of Arsenophonus nasoniae, son-killer bacterium of Nasonia vitripennis, reveals genes associated with virulence and symbiosis Insect Mol Biol. Evol. 19(S1): 59-73. [publisher link]
Darby, A.C., J. Choi, J.K. T. Wilkes, M.A. Hughes, J.H. Werren, G.D.D. Hurst, and J.K. Colbourne (2010) Characteristics of the genome of Arsenophonus nasoniae, son-killer bacterium of the wasp Nasonia. Insect Mol. Biol. 19(S1):75-89. [pubmed link]
Chang, J., A. Masters, A. Avery and J.H. Werren (2010) Diverse and Divergent Cardinium endosymbionts in Daddy Long-Legs (Arachnida: Opiliones). Journal of Invertebrate Pathology. [doi link]
Stock, S.P., S.R. Bordenstein , J. Odden, D. Oldenburg , W. Reznikoff , M. Selosse, and J.H. Werren (2010) Symbiosis Instruction: Considerations from the Education Workshop at the 6th ISS Congress. Symbiosis 51:67-73. [doi link]